Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AL031587.5-201ENST00000624344 1849 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC091807.1-201ENST00000418838 1544 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SDCBP2P1-201ENST00000416115 614 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 PHBP10-201ENST00000416467 784 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AL136084.1-201ENST00000449172 318 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AL451000.1-201ENST00000451300 1186 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 HNRNPLP1-201ENST00000421896 1501 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 Z98257.2-202ENST00000641138 1548 ntBASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20BQ9P0W2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 GHET1-201ENST00000627071 1906 ntBASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20BQ9P0W2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AL929302.1-201ENST00000426556 871 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AC010086.2-201ENST00000428616 226 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 SNORA47-201ENST00000458862 138 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 DNM1P51-201ENST00000558149 522 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 ABHD17AP9-201ENST00000561925 548 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AP000553.2-201ENST00000609038 441 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms