Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC068620.4-201ENST00000636730 1182 ntBASIC12.62□□□□□ -0.39
HPS1Q92902 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 AP000593.2-201ENST00000542775 1433 ntBASIC12.62□□□□□ -0.39
HPS1Q92902 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 AL138725.1-201ENST00000407347 1314 ntBASIC12.62□□□□□ -0.39
HPS1Q92902 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.62□□□□□ -0.39
HPS1Q92902 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 SLC25A24P2-201ENST00000415059 510 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 RPS3AP29-201ENST00000437728 769 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 MTND1P31-201ENST00000449206 961 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 BX284668.4-201ENST00000453917 508 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 AP003041.2-201ENST00000525666 1180 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AC106820.3-201ENST00000561653 397 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC12.61□□□□□ -0.39
HPS1Q92902 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AL096828.3-201ENST00000615354 462 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 AC138907.10-201ENST00000623708 983 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 OR2I1P-208ENST00000641137 4948 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.61□□□□□ -0.39
HPS1Q92902 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.61□□□□□ -0.39
HPS1Q92902 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms