Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 PGAM1P12-201ENST00000505622 748 ntBASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 AC137723.2-201ENST00000623540 398 ntBASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 FRG2EP-201ENST00000634243 835 ntBASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 TUBB8P5-201ENST00000445286 1351 ntBASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHROOM3Q8TF72 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 DDX12P-201ENST00000432996 2947 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 METTL23-211ENST00000589977 617 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AL022323.5-201ENST00000624101 2059 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 PGK1P2-201ENST00000431702 1214 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AP005212.2-201ENST00000584979 510 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 GUCY2EP-203ENST00000531117 1918 ntBASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHROOM3Q8TF72 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.66□□□□□ -0.22
SHROOM3Q8TF72 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHROOM3Q8TF72 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms