Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
MMP13P45452 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 AL353726.2-201ENST00000623259 884 ntBASIC14.06□□□□□ -0.16
MMP13P45452 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 LINC02228-202ENST00000641261 2489 ntBASIC14.06□□□□□ -0.16
MMP13P45452 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MMP13P45452 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.05□□□□□ -0.16
MMP13P45452 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MMP13P45452 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP13P45452 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 PRSS3P1-201ENST00000503996 742 ntBASIC14.05□□□□□ -0.16
MMP13P45452 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP13P45452 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP13P45452 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.05□□□□□ -0.16
MMP13P45452 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MMP13P45452 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP13P45452 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 CTAGE13P-201ENST00000416709 2446 ntBASIC14.05□□□□□ -0.16
MMP13P45452 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.05□□□□□ -0.16
MMP13P45452 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 LINC00563-201ENST00000566370 1400 ntBASIC14.05□□□□□ -0.16
MMP13P45452 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MMP13P45452 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP13P45452 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
MMP13P45452 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP13P45452 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP13P45452 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP13P45452 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP13P45452 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms