Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR6769A-201ENST00000617340 73 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 BX284668.2-205ENST00000619677 828 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 FAM95B1-212ENST00000592873 4692 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC022497.1-201ENST00000624916 3691 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC007336.3-201ENST00000623886 2160 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 MIR1307-201ENST00000408840 149 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC016700.1-201ENST00000429424 312 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 POU5F1P2-201ENST00000521750 823 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AC100757.4-201ENST00000626934 759 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 AL133338.1-201ENST00000565695 1517 ntBASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC50Q8IVM0 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms