Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RNA5SP324-201ENST00000365177 108 ntBASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 AC073254.1-201ENST00000415506 1162 ntTSL 5 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 FRG2FP-202ENST00000419104 559 ntTSL 4 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 UBQLN4P2-201ENST00000446233 948 ntBASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 LYPLA1-213ENST00000522007 250 ntTSL 2 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 CSH1-206ENST00000610991 580 ntTSL 5 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 Metazoa_SRP.102-201ENST00000613350 315 ntBASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 AC019294.1-202ENST00000566174 2071 ntBASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 CD83P1-201ENST00000405625 572 ntBASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 AC093422.1-201ENST00000448403 552 ntBASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 HINT1P1-201ENST00000464866 378 ntBASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 ARHGAP22-IT1-201ENST00000505718 470 ntTSL 3 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 AC091027.1-201ENST00000580639 523 ntTSL 3 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 ITGB2-AS1-205ENST00000609694 555 ntTSL 4 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 CISTR-202ENST00000626733 464 ntTSL 3 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 AL358781.1-202ENST00000321081 1360 ntBASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIMBP3Q9UFD9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 GNRH2-201ENST00000245983 425 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 GNRH2-202ENST00000359100 404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 TPD52L1-204ENST00000392482 1165 ntTSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 LINC00454-201ENST00000425483 503 ntTSL 3 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 PIGQP1-201ENST00000426300 430 ntBASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 AC002511.1-201ENST00000428426 1000 ntTSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 AP000759.1-201ENST00000531086 397 ntTSL 3 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 Metazoa_SRP.177-201ENST00000621099 283 ntBASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 SMARCE1-203ENST00000377808 1307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIMBP3Q9UFD9 OR2T35-201ENST00000317450 972 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 OR2T2-201ENST00000342927 1054 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 AC008267.2-201ENST00000411606 981 ntBASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 HNRNPA3P3-201ENST00000416838 1137 ntBASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 MEG8-205ENST00000442197 625 ntTSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 CTSC-206ENST00000529974 747 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 AC010203.2-201ENST00000550886 418 ntTSL 3 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 RN7SL73P-201ENST00000585239 252 ntBASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 AL591926.3-201ENST00000611630 238 ntBASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 THEMIS3P-201ENST00000416112 1586 ntBASIC20.05■□□□□ 0.8
RIMBP3Q9UFD9 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms