Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR1914-201ENST00000607800 80 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 FAM223A-202ENST00000625204 713 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 TCAF1P1-201ENST00000414990 2232 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AP002414.2-201ENST00000591780 3365 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 MIPEPP1-201ENST00000413533 2027 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 DDX6P2-201ENST00000619520 1455 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 HNRNPA1P30-202ENST00000440699 997 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 OR52X1P-201ENST00000446117 914 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC108082.1-201ENST00000510857 331 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC080023.2-201ENST00000532615 208 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC136475.6-201ENST00000533113 289 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 MIR378I-201ENST00000582688 76 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 AC015912.3-201ENST00000619432 348 ntBASIC16.57■□□□□ 0.24
RC3H1Q5TC82 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RC3H1Q5TC82 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 PKMP1-201ENST00000455804 1523 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC015959.1-201ENST00000623263 1377 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC072061.1-201ENST00000569710 2234 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 KRT18P45-201ENST00000515347 1333 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC069061.4-201ENST00000581294 1347 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AL929472.4-201ENST00000447422 691 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 RN7SL69P-201ENST00000468423 272 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 CMC2-202ENST00000486645 766 ntTSL 3 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AC067942.2-201ENST00000506227 1268 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 MT1G-204ENST00000569500 305 ntTSL 3 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 AL160287.1-203ENST00000637960 1061 ntBASIC16.56■□□□□ 0.24
RC3H1Q5TC82 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RC3H1Q5TC82 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms