Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.55□□□□□ -0.4
PRICKLE4Q2TBC4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC011247.3-201ENST00000603297 438 ntBASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 C2orf27AP1-201ENST00000618128 586 ntBASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 KRT18P40-201ENST00000599859 1571 ntBASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PCDHB18P-202ENST00000526308 3197 ntBASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PRICKLE4Q2TBC4 AC139491.6-202ENST00000637171 2077 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 KRT8P25-201ENST00000473150 1456 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AP000354.1-201ENST00000396982 456 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AC008267.1-201ENST00000474858 1069 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 LINC00634-202ENST00000505157 222 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 FAM187B2P-201ENST00000577135 713 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 SPCS2P2-201ENST00000603270 608 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 RN7SL736P-201ENST00000613111 269 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.53□□□□□ -0.4
PRICKLE4Q2TBC4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms