Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 MKRN7P-201ENST00000433469 1371 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1DP48730 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CSNK1DP48730 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1DP48730 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CSNK1DP48730 AC114781.1-201ENST00000450559 1028 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 VTI1BP1-201ENST00000486325 700 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1DP48730 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1DP48730 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.47□□□□□ -0.25
CSNK1DP48730 AC078814.4-201ENST00000546650 327 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1DP48730 RN7SL605P-201ENST00000577229 281 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.47□□□□□ -0.25
CSNK1DP48730 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.47□□□□□ -0.25
CSNK1DP48730 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CSNK1DP48730 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1DP48730 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1DP48730 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1DP48730 DDX12P-201ENST00000432996 2947 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 AC019294.4-201ENST00000561777 2905 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 AC115284.2-201ENST00000624646 2054 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CSNK1DP48730 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CSNK1DP48730 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1DP48730 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CSNK1DP48730 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CSNK1DP48730 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1DP48730 SSR4P1-201ENST00000415143 412 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 GGT8P-201ENST00000418938 532 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 NRADDP-201ENST00000437305 691 ntBASIC13.46□□□□□ -0.25
CSNK1DP48730 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms