Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC17.73■□□□□ 0.43
USP6P35125 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 AC053503.3-201ENST00000448375 114 ntBASIC17.73■□□□□ 0.43
USP6P35125 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC17.73■□□□□ 0.43
USP6P35125 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC17.73■□□□□ 0.43
USP6P35125 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 AL606834.1-201ENST00000553836 1169 ntBASIC17.73■□□□□ 0.43
USP6P35125 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 MED11-203ENST00000575284 652 ntTSL 3 BASIC17.73■□□□□ 0.43
USP6P35125 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 AC009779.7-201ENST00000609031 469 ntBASIC17.73■□□□□ 0.43
USP6P35125 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC17.73■□□□□ 0.43
USP6P35125 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 BEND3P3-201ENST00000611030 2440 ntBASIC17.73■□□□□ 0.43
USP6P35125 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC17.73■□□□□ 0.43
USP6P35125 AL450468.2-201ENST00000565955 1889 ntBASIC17.73■□□□□ 0.43
USP6P35125 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.73■□□□□ 0.43
USP6P35125 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC17.73■□□□□ 0.43
USP6P35125 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP6P35125 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.73■□□□□ 0.43
USP6P35125 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP6P35125 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
USP6P35125 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC17.72■□□□□ 0.43
USP6P35125 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 AC087893.1-201ENST00000612818 664 ntBASIC17.72■□□□□ 0.43
USP6P35125 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
USP6P35125 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 AC109326.1-201ENST00000624705 1321 ntBASIC17.72■□□□□ 0.43
USP6P35125 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 AC130686.1-201ENST00000622936 2466 ntBASIC17.72■□□□□ 0.43
USP6P35125 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 POM121L14P-201ENST00000406100 1558 ntBASIC17.72■□□□□ 0.43
USP6P35125 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
USP6P35125 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC17.72■□□□□ 0.43
USP6P35125 AL136298.3-201ENST00000556746 445 ntBASIC17.72■□□□□ 0.43
USP6P35125 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC17.72■□□□□ 0.43
USP6P35125 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP6P35125 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 AC007450.4-201ENST00000614709 524 ntBASIC17.72■□□□□ 0.43
USP6P35125 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
USP6P35125 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP6P35125 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 AC139491.6-202ENST00000637171 2077 ntBASIC17.71■□□□□ 0.43
USP6P35125 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP6P35125 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 MIR766-201ENST00000390223 111 ntBASIC17.71■□□□□ 0.43
USP6P35125 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
USP6P35125 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms