Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 AC125807.2-201ENST00000513358 3514 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 GEMIN8P4-201ENST00000380526 729 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 MIR1301-201ENST00000408518 82 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 AL355334.1-201ENST00000417713 215 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 AC015818.1-201ENST00000451011 244 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 SRPK2P-201ENST00000523408 1100 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.12□□□□□ -0.47
ZIC3O60481 AC104758.3-203ENST00000562938 2123 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 MFSD12-215ENST00000615613 688 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 AC135506.1-201ENST00000603877 1799 ntBASIC12.12□□□□□ -0.47
ZIC3O60481 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZIC3O60481 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.12□□□□□ -0.47
ZIC3O60481 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZIC3O60481 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.11□□□□□ -0.47
ZIC3O60481 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZIC3O60481 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ZIC3O60481 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ZIC3O60481 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 OR2T32P-201ENST00000403423 963 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 OR51A9P-201ENST00000422578 911 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 AC114501.1-201ENST00000445949 172 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 SNORA47-201ENST00000458862 138 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 AC063952.3-201ENST00000467756 308 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 RN7SL147P-201ENST00000487345 298 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 AC112250.1-201ENST00000504640 745 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.11□□□□□ -0.47
ZIC3O60481 AC078814.4-201ENST00000546650 327 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.11□□□□□ -0.47
ZIC3O60481 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.11□□□□□ -0.47
ZIC3O60481 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.11□□□□□ -0.47
ZIC3O60481 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZIC3O60481 AC211476.2-201ENST00000608799 708 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 DUX4L33-201ENST00000635217 958 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 MEP1AP1-201ENST00000636082 1097 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.11□□□□□ -0.47
ZIC3O60481 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms