Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 AC010336.1-201ENST00000539278 4739 ntBASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 AC092123.2-201ENST00000611189 5421 ntBASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AL359845.1-201ENST00000458202 1648 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 LINC00638-201ENST00000555578 2518 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 GGTLC4P-201ENST00000402176 664 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AC092903.1-201ENST00000466506 262 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AL136982.5-201ENST00000605222 294 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CSTP2-201ENST00000610599 398 ntBASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPA3F8WFD2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 AGAP12P-201ENST00000585227 2359 ntBASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 ZNF493-208ENST00000599461 1769 ntBASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 FKBP4P8-201ENST00000610931 1369 ntBASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 AC106827.1-201ENST00000366454 431 ntBASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.36□□□□□ -0.43
NPIPA3F8WFD2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms