Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 CNN2P8-201ENST00000421872 913 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 FAM58BP-201ENST00000439056 645 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 CNN2P10-201ENST00000443067 918 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 FTH1P14-201ENST00000482930 551 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 KRT90P-201ENST00000549264 1064 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AC100827.2-201ENST00000563214 1194 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 RN7SL455P-201ENST00000580629 282 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AL355385.1-201ENST00000606123 409 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 AC015818.9-201ENST00000591705 4582 ntBASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RCL1Q9Y2P8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC009108.4-201ENST00000623284 2451 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC080013.1-204ENST00000607426 2185 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 HLA-V-201ENST00000429037 534 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 XBP1P1-201ENST00000436573 652 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC011742.3-201ENST00000439053 820 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 BCRP2-202ENST00000447763 634 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 INGX-202ENST00000489074 768 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC100850.1-201ENST00000506768 649 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 BCRP6-201ENST00000510112 632 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 BCRP7-201ENST00000511549 544 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 MIR3940-201ENST00000579148 102 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RCL1Q9Y2P8 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms