Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1DP48730 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 AL080243.1-201ENST00000423293 1060 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 RPL35P1-201ENST00000450819 370 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 CXXC1P1-202ENST00000489409 1212 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 AC092862.1-201ENST00000541534 533 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 AC091304.3-201ENST00000566500 716 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 AC211476.2-201ENST00000608799 708 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1DP48730 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 ZDHHC8P1-202ENST00000418264 1403 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AC011477.7-201ENST00000617163 1440 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CSNK1DP48730 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1DP48730 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 PHBP10-201ENST00000416467 784 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CSNK1DP48730 ZNF877P-201ENST00000437614 612 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 FAM86B3P-203ENST00000523992 854 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSNK1DP48730 PHBP18-201ENST00000546648 813 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AC068831.5-201ENST00000557387 328 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.48□□□□□ -0.25
CSNK1DP48730 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.48□□□□□ -0.25
CSNK1DP48730 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC13.48□□□□□ -0.25
CSNK1DP48730 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1DP48730 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1DP48730 TCAF1P1-201ENST00000414990 2232 ntBASIC13.48□□□□□ -0.25
CSNK1DP48730 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1DP48730 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms