Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 RN7SL846P-201ENST00000467429 292 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL353622.2-201ENST00000605846 425 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 SNORA50D-202ENST00000627561 132 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 AC130686.1-201ENST00000622936 2466 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 AC011477.7-201ENST00000617163 1440 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.15□□□□□ -0.15
MTHFRP42898 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.15□□□□□ -0.15
MTHFRP42898 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.14□□□□□ -0.15
MTHFRP42898 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.14□□□□□ -0.15
MTHFRP42898 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 TPT1P9-201ENST00000413759 514 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 RPL18AP15-201ENST00000430258 517 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 ACTG1P23-201ENST00000437653 1074 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.14□□□□□ -0.15
MTHFRP42898 YBX1P3-201ENST00000468366 909 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.14□□□□□ -0.15
MTHFRP42898 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.14□□□□□ -0.15
MTHFRP42898 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.14□□□□□ -0.15
MTHFRP42898 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.14□□□□□ -0.15
MTHFRP42898 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 AC244097.1-201ENST00000621631 1216 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 AC005865.2-202ENST00000635814 725 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 AL590556.2-202ENST00000636906 844 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MTHFRP42898 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 TCAF1P1-201ENST00000414990 2232 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MTHFRP42898 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MTHFRP42898 AC105206.1-202ENST00000314927 2368 ntBASIC14.14□□□□□ -0.15
MTHFRP42898 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.13□□□□□ -0.15
MTHFRP42898 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.13□□□□□ -0.15
MTHFRP42898 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
MTHFRP42898 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MTHFRP42898 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
MTHFRP42898 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.13□□□□□ -0.15
MTHFRP42898 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.13□□□□□ -0.15
MTHFRP42898 B9D1-206ENST00000461069 923 ntTSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms