Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ANKRD26P1-203ENST00000569528 966 ntBASIC17.14■□□□□ 0.33
CHL1O00533 AC008622.3-201ENST00000621170 600 ntBASIC17.14■□□□□ 0.33
CHL1O00533 AC020904.3-201ENST00000624199 442 ntBASIC17.14■□□□□ 0.33
CHL1O00533 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 AHCYP7-201ENST00000560847 1308 ntBASIC17.14■□□□□ 0.33
CHL1O00533 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 AIFM1P1-201ENST00000413342 1841 ntBASIC17.14■□□□□ 0.33
CHL1O00533 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHL1O00533 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 AC124319.4-201ENST00000622931 2161 ntBASIC17.13■□□□□ 0.33
CHL1O00533 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHL1O00533 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHL1O00533 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 RNA5SP84-201ENST00000364740 107 ntBASIC17.13■□□□□ 0.33
CHL1O00533 COQ4-202ENST00000372875 928 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 AF274858.1-201ENST00000406288 372 ntBASIC17.13■□□□□ 0.33
CHL1O00533 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 CDCA4P4-201ENST00000435216 680 ntBASIC17.13■□□□□ 0.33
CHL1O00533 HLA-W-207ENST00000439514 771 ntBASIC17.13■□□□□ 0.33
CHL1O00533 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.13■□□□□ 0.33
CHL1O00533 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CHL1O00533 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.13■□□□□ 0.33
CHL1O00533 NAV1-210ENST00000593583 726 ntBASIC17.13■□□□□ 0.33
CHL1O00533 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHL1O00533 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHL1O00533 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHL1O00533 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.13■□□□□ 0.33
CHL1O00533 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHL1O00533 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
CHL1O00533 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHL1O00533 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 GAPDHP29-201ENST00000429913 985 ntBASIC17.12■□□□□ 0.33
CHL1O00533 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC17.12■□□□□ 0.33
CHL1O00533 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC17.12■□□□□ 0.33
CHL1O00533 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHL1O00533 ACTBP9-201ENST00000587663 1099 ntBASIC17.12■□□□□ 0.33
CHL1O00533 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.12■□□□□ 0.33
CHL1O00533 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.12■□□□□ 0.33
CHL1O00533 PRMT1P1-201ENST00000604252 1009 ntBASIC17.12■□□□□ 0.33
CHL1O00533 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.12■□□□□ 0.33
CHL1O00533 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHL1O00533 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHL1O00533 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms