Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.89□□□□□ -0.35
SCN2BO60939 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.89□□□□□ -0.35
SCN2BO60939 Z82244.1-201ENST00000631502 840 ntBASIC12.89□□□□□ -0.35
SCN2BO60939 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.89□□□□□ -0.35
SCN2BO60939 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 TNRC18P1-201ENST00000502875 3650 ntBASIC12.89□□□□□ -0.35
SCN2BO60939 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SCN2BO60939 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.89□□□□□ -0.35
SCN2BO60939 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SCN2BO60939 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCN2BO60939 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SCN2BO60939 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 AC008764.8-201ENST00000623966 2717 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 DDX12P-201ENST00000432996 2947 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SCN2BO60939 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.88□□□□□ -0.35
SCN2BO60939 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.88□□□□□ -0.35
SCN2BO60939 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.88□□□□□ -0.35
SCN2BO60939 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 AC020914.3-201ENST00000594712 304 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 AC243960.2-201ENST00000600996 747 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 AC012073.1-201ENST00000606114 1108 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 AC010336.1-201ENST00000539278 4739 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 AOC4P-203ENST00000566825 2289 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.88□□□□□ -0.35
SCN2BO60939 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.88□□□□□ -0.35
SCN2BO60939 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCN2BO60939 AC006144.1-201ENST00000424220 1600 ntBASIC12.88□□□□□ -0.35
SCN2BO60939 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.87□□□□□ -0.35
SCN2BO60939 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 AC138028.6-201ENST00000616106 1482 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms