Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MTHFD2P7-201ENST00000483867 983 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.69□□□□□ -0.22
KDELR3O43731 AP000920.1-201ENST00000531824 344 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 RN7SL162P-201ENST00000579233 292 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 AC113385.2-201ENST00000614465 762 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.69□□□□□ -0.22
KDELR3O43731 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 AC005274.1-201ENST00000623460 802 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
KDELR3O43731 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.69□□□□□ -0.22
KDELR3O43731 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 AL031587.5-201ENST00000624344 1849 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 AC135506.1-201ENST00000603877 1799 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 AL445209.1-201ENST00000607269 3491 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 AC004241.5-201ENST00000623870 2448 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KDELR3O43731 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 SDCBP2P1-201ENST00000416115 614 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KDELR3O43731 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 NDUFB2P1-201ENST00000506966 295 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
KDELR3O43731 AP005264.6-204ENST00000588436 719 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 AC064850.1-201ENST00000413279 1398 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 FKBP4P8-201ENST00000610931 1369 ntBASIC13.68□□□□□ -0.22
KDELR3O43731 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KDELR3O43731 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KDELR3O43731 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KDELR3O43731 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KDELR3O43731 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms