Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.48□□□□□ -0.09
O00370 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.48□□□□□ -0.09
O00370 AC079112.1-201ENST00000454972 939 ntBASIC14.48□□□□□ -0.09
O00370 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.48□□□□□ -0.09
O00370 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.48□□□□□ -0.09
O00370 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.48□□□□□ -0.09
O00370 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.48□□□□□ -0.09
O00370 NPM1P43-201ENST00000558669 786 ntBASIC14.48□□□□□ -0.09
O00370 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.48□□□□□ -0.09
O00370 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
O00370 AC092053.3-201ENST00000641308 4975 ntBASIC14.48□□□□□ -0.09
O00370 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.48□□□□□ -0.09
O00370 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
O00370 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 PEG13-201ENST00000631594 5667 ntBASIC14.48□□□□□ -0.09
O00370 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
O00370 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
O00370 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.48□□□□□ -0.09
O00370 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
O00370 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 AC090502.4-201ENST00000551714 1386 ntBASIC14.47□□□□□ -0.09
O00370 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
O00370 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
O00370 RPSAP31-201ENST00000416648 895 ntBASIC14.47□□□□□ -0.09
O00370 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.47□□□□□ -0.09
O00370 AC092638.2-201ENST00000441105 947 ntBASIC14.47□□□□□ -0.09
O00370 GULOP-201ENST00000454030 748 ntBASIC14.47□□□□□ -0.09
O00370 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.47□□□□□ -0.09
O00370 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.47□□□□□ -0.09
O00370 Z82244.1-201ENST00000631502 840 ntBASIC14.47□□□□□ -0.09
O00370 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
O00370 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.47□□□□□ -0.09
O00370 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
O00370 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.47□□□□□ -0.09
O00370 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
O00370 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.47□□□□□ -0.09
O00370 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
O00370 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
O00370 VENTXP1-201ENST00000569334 2716 ntBASIC14.46□□□□□ -0.09
O00370 AC002350.2-201ENST00000623894 1828 ntBASIC14.46□□□□□ -0.09
O00370 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
O00370 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
O00370 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.46□□□□□ -0.09
O00370 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
O00370 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms