Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 DUX4L18-201ENST00000553347 1267 ntBASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 AC087742.1-201ENST00000575880 1738 ntBASIC19.71■□□□□ 0.75
SF3B6Q9Y3B4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3B6Q9Y3B4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B6Q9Y3B4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 AL353803.4-201ENST00000565882 1934 ntBASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 SPCS2P3-201ENST00000500401 656 ntBASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.68■□□□□ 0.74
SF3B6Q9Y3B4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 AC087393.1-201ENST00000582896 145 ntBASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.67■□□□□ 0.74
SF3B6Q9Y3B4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 BHLHE23-202ENST00000612929 1109 ntBASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SF3B6Q9Y3B4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 AC139795.1-202ENST00000500444 432 ntBASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B6Q9Y3B4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SF3B6Q9Y3B4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 AC074183.2-201ENST00000623112 922 ntBASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.64■□□□□ 0.73
SF3B6Q9Y3B4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms