Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
RCL1Q9Y2P8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RCL1Q9Y2P8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 AC131274.2-201ENST00000580697 1507 ntBASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCL1Q9Y2P8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 AC080038.3-201ENST00000623346 1952 ntBASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 AC022413.1-201ENST00000624602 984 ntBASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.12■□□□□ 0.49
RCL1Q9Y2P8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 AL592295.1-201ENST00000400984 884 ntBASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 RPS2P7-201ENST00000447334 885 ntBASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCL1Q9Y2P8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCL1Q9Y2P8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCL1Q9Y2P8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCL1Q9Y2P8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCL1Q9Y2P8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCL1Q9Y2P8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RCL1Q9Y2P8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.08■□□□□ 0.49
RCL1Q9Y2P8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RCL1Q9Y2P8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RCL1Q9Y2P8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.08■□□□□ 0.48
RCL1Q9Y2P8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCL1Q9Y2P8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RCL1Q9Y2P8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms