Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 AC024257.2-201ENST00000549699 147 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 pRNA.6-201ENST00000610482 90 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 pRNA.5-201ENST00000612139 90 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 pRNA.11-201ENST00000618423 90 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 pRNA.13-201ENST00000619112 90 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 AC135279.3-201ENST00000610945 1311 ntBASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3AQ9Y2J0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 LINC01529-204ENST00000636474 1715 ntBASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 ANOS2P-203ENST00000472227 1816 ntBASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPH3AQ9Y2J0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPH3AQ9Y2J0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 FP325331.1-202ENST00000623531 1380 ntBASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 MIR3181-201ENST00000578512 73 ntBASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 AC106739.1-201ENST00000617035 715 ntBASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPH3AQ9Y2J0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 AL353803.4-201ENST00000565882 1934 ntBASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 AC092068.2-201ENST00000590491 1708 ntBASIC20.22■□□□□ 0.83
RPH3AQ9Y2J0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 AC026271.2-201ENST00000428091 497 ntBASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 AC104564.3-201ENST00000582367 638 ntBASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.21■□□□□ 0.83
RPH3AQ9Y2J0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 DUX4L4-201ENST00000566884 1269 ntBASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPH3AQ9Y2J0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms