Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
CDK11AQ9UQ88 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.73■■■■□ 3.15
CDK11AQ9UQ88 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
CDK11AQ9UQ88 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CDK11AQ9UQ88 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.73■■■■□ 3.15
CDK11AQ9UQ88 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
CDK11AQ9UQ88 ID1-201ENST00000376105 1233 ntBASIC34.72■■■■□ 3.15
CDK11AQ9UQ88 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CDK11AQ9UQ88 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CDK11AQ9UQ88 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDK11AQ9UQ88 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC34.7■■■■□ 3.14
CDK11AQ9UQ88 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 MFF-208ENST00000409616 1247 ntTSL 5 BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
CDK11AQ9UQ88 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
CDK11AQ9UQ88 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CDK11AQ9UQ88 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CDK11AQ9UQ88 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CDK11AQ9UQ88 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC34.68■■■■□ 3.14
CDK11AQ9UQ88 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDK11AQ9UQ88 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDK11AQ9UQ88 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CDK11AQ9UQ88 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CDK11AQ9UQ88 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CDK11AQ9UQ88 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDK11AQ9UQ88 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
CDK11AQ9UQ88 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.63■■■■□ 3.13
CDK11AQ9UQ88 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.63■■■■□ 3.13
CDK11AQ9UQ88 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CDK11AQ9UQ88 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDK11AQ9UQ88 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDK11AQ9UQ88 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CDK11AQ9UQ88 AC142381.3-201ENST00000568208 1670 ntBASIC34.6■■■■□ 3.13
CDK11AQ9UQ88 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
CDK11AQ9UQ88 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CDK11AQ9UQ88 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 TPRG1LP1-201ENST00000598702 760 ntBASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms