Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA6Q9UN73 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 AL031432.3-201ENST00000607698 485 ntBASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 AC011298.3-201ENST00000615796 283 ntBASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA6Q9UN73 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 MIR4767-201ENST00000582827 78 ntBASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA6Q9UN73 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 AC019069.1-201ENST00000610008 1333 ntBASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA6Q9UN73 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA6Q9UN73 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA6Q9UN73 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA6Q9UN73 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA6Q9UN73 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PCDHA6Q9UN73 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 EDA-201ENST00000338901 1233 ntBASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 AC136469.2-201ENST00000623944 1028 ntBASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA6Q9UN73 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 SUDS3P1-201ENST00000505831 966 ntBASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 AL355001.2-201ENST00000620617 1191 ntBASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.48■■□□□ 1.67
PCDHA6Q9UN73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 AL499627.2-201ENST00000606283 725 ntBASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA6Q9UN73 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA6Q9UN73 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.67
PCDHA6Q9UN73 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.45■■□□□ 1.67
PCDHA6Q9UN73 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms