Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.54■□□□□ 0.88
TMCC3Q9ULS5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 DUX4L18-201ENST00000553347 1267 ntBASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 BHLHE23-202ENST00000612929 1109 ntBASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 AL353803.4-201ENST00000565882 1934 ntBASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMCC3Q9ULS5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 AC004448.1-201ENST00000458332 883 ntBASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 THA1P-201ENST00000590384 1145 ntBASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMCC3Q9ULS5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMCC3Q9ULS5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMCC3Q9ULS5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMCC3Q9ULS5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.52■□□□□ 0.87
TMCC3Q9ULS5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMCC3Q9ULS5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 ABHD17AP5-201ENST00000580133 923 ntBASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 AF131216.4-201ENST00000638924 1588 ntBASIC20.51■□□□□ 0.87
TMCC3Q9ULS5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 KRT18P24-201ENST00000344739 1156 ntBASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMCC3Q9ULS5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 MIR4281-201ENST00000580852 62 ntBASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMCC3Q9ULS5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMCC3Q9ULS5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TMCC3Q9ULS5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms