Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC135731.1-201ENST00000569415 2548 ntBASIC22.18■■□□□ 1.14
NCDNQ9UBB6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 AC011767.1-201ENST00000617410 1153 ntBASIC22.17■■□□□ 1.14
NCDNQ9UBB6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
NCDNQ9UBB6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 AP004607.4-201ENST00000530158 1459 ntBASIC22.16■■□□□ 1.14
NCDNQ9UBB6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 AC004854.2-201ENST00000608450 1441 ntBASIC22.16■■□□□ 1.14
NCDNQ9UBB6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 DUX4L4-201ENST00000566884 1269 ntBASIC22.16■■□□□ 1.14
NCDNQ9UBB6 AC142086.2-201ENST00000569753 217 ntBASIC22.16■■□□□ 1.14
NCDNQ9UBB6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 ERN1-208ENST00000606895 2068 ntBASIC22.16■■□□□ 1.14
NCDNQ9UBB6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
NCDNQ9UBB6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 KRT18P11-201ENST00000435214 1283 ntBASIC22.15■■□□□ 1.14
NCDNQ9UBB6 OR2I1P-207ENST00000453522 948 ntBASIC22.15■■□□□ 1.14
NCDNQ9UBB6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.15■■□□□ 1.14
NCDNQ9UBB6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.14■■□□□ 1.13
NCDNQ9UBB6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCDNQ9UBB6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCDNQ9UBB6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NCDNQ9UBB6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.14■■□□□ 1.13
NCDNQ9UBB6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NCDNQ9UBB6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.13■■□□□ 1.13
NCDNQ9UBB6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCDNQ9UBB6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCDNQ9UBB6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.13■■□□□ 1.13
NCDNQ9UBB6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 AL121832.2-201ENST00000610979 668 ntBASIC22.12■■□□□ 1.13
NCDNQ9UBB6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.12■■□□□ 1.13
NCDNQ9UBB6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NCDNQ9UBB6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 MIR4651-201ENST00000582622 73 ntBASIC22.1■■□□□ 1.13
NCDNQ9UBB6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.1■■□□□ 1.13
NCDNQ9UBB6 AC145676.1-201ENST00000514988 2004 ntBASIC22.09■■□□□ 1.13
NCDNQ9UBB6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCDNQ9UBB6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms