Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LIN28AQ9H9Z2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 AC137767.1-201ENST00000602918 1920 ntBASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LIN28AQ9H9Z2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIN28AQ9H9Z2 LINC00526-201ENST00000581067 1875 ntBASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIN28AQ9H9Z2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.21■□□□□ 0.99
LIN28AQ9H9Z2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
LIN28AQ9H9Z2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 MIR3621-201ENST00000580529 85 ntBASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 AL356740.2-201ENST00000601559 647 ntBASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LIN28AQ9H9Z2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 AC008406.3-201ENST00000620001 1374 ntBASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIN28AQ9H9Z2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN28AQ9H9Z2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.17■□□□□ 0.98
LIN28AQ9H9Z2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIN28AQ9H9Z2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.17■□□□□ 0.98
LIN28AQ9H9Z2 AC131281.2-201ENST00000520478 145 ntBASIC21.17■□□□□ 0.98
LIN28AQ9H9Z2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms