Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RNF38Q9H0F5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF38Q9H0F5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 AC097381.1-201ENST00000429019 1296 ntBASIC23.14■■□□□ 1.29
RNF38Q9H0F5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF38Q9H0F5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 OR2I1P-207ENST00000453522 948 ntBASIC23.13■■□□□ 1.29
RNF38Q9H0F5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF38Q9H0F5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 AC087623.3-201ENST00000607047 1098 ntBASIC23.12■■□□□ 1.29
RNF38Q9H0F5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
RNF38Q9H0F5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RNF38Q9H0F5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF38Q9H0F5 AL353803.4-201ENST00000565882 1934 ntBASIC23.11■■□□□ 1.29
RNF38Q9H0F5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF38Q9H0F5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 IGHV3-19-201ENST00000521488 291 ntBASIC23.1■■□□□ 1.29
RNF38Q9H0F5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 MIR5787-201ENST00000611784 55 ntBASIC23.1■■□□□ 1.29
RNF38Q9H0F5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF38Q9H0F5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RNF38Q9H0F5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF38Q9H0F5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF38Q9H0F5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
RNF38Q9H0F5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms