Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP3-3Q9BYR6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
KRTAP3-3Q9BYR6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 MTND1P29-201ENST00000448112 647 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC027807.1-201ENST00000559921 996 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC105129.3-201ENST00000605455 485 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC013562.2-201ENST00000611632 603 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AC004943.3-201ENST00000624116 600 ntBASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP3-3Q9BYR6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC021766.1-201ENST00000624404 741 ntBASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.55□□□□□ -0.24
KRTAP3-3Q9BYR6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 PCNPP4-201ENST00000414817 517 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 BX119904.4-201ENST00000424402 301 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 BMS1P12-201ENST00000428213 706 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 VDAC1P12-201ENST00000451853 882 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AL158068.1-201ENST00000506116 616 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AC106806.2-201ENST00000509365 500 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 AC139713.2-210ENST00000641741 992 ntBASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP3-3Q9BYR6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 VN1R66P-201ENST00000412929 916 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 VN1R108P-201ENST00000431580 830 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC021146.5-201ENST00000503544 545 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AP001372.4-201ENST00000524889 472 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC092474.3-201ENST00000603022 568 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC112220.2-201ENST00000605513 533 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AL391834.2-201ENST00000609982 546 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 MIR3974-201ENST00000637126 96 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AC104794.2-201ENST00000567540 1572 ntBASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP3-3Q9BYR6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 AP002852.2-201ENST00000519630 740 ntTSL 5 BASIC13.52□□□□□ -0.25
KRTAP3-3Q9BYR6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms