Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCL19Q99731 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL19Q99731 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL19Q99731 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL19Q99731 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.91■□□□□ 0.62
CCL19Q99731 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL19Q99731 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL19Q99731 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL19Q99731 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 LINC01529-204ENST00000636474 1715 ntBASIC18.91■□□□□ 0.62
CCL19Q99731 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL19Q99731 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL19Q99731 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.9■□□□□ 0.62
CCL19Q99731 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCL19Q99731 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL19Q99731 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL19Q99731 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.9■□□□□ 0.62
CCL19Q99731 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL19Q99731 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCL19Q99731 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL19Q99731 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCL19Q99731 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.9■□□□□ 0.62
CCL19Q99731 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL19Q99731 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.89■□□□□ 0.61
CCL19Q99731 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.89■□□□□ 0.61
CCL19Q99731 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCL19Q99731 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.89■□□□□ 0.61
CCL19Q99731 AC022211.4-201ENST00000625094 2161 ntBASIC18.89■□□□□ 0.61
CCL19Q99731 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCL19Q99731 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCL19Q99731 AC144652.1-201ENST00000609974 1624 ntBASIC18.89■□□□□ 0.61
CCL19Q99731 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL19Q99731 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL19Q99731 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.88■□□□□ 0.61
CCL19Q99731 AC016769.1-201ENST00000409132 1010 ntBASIC18.88■□□□□ 0.61
CCL19Q99731 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.88■□□□□ 0.61
CCL19Q99731 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL19Q99731 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL19Q99731 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL19Q99731 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCL19Q99731 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL19Q99731 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.87■□□□□ 0.61
CCL19Q99731 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL19Q99731 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCL19Q99731 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL19Q99731 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCL19Q99731 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL19Q99731 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 AC137761.2-201ENST00000561729 223 ntBASIC18.86■□□□□ 0.61
CCL19Q99731 AC145350.3-201ENST00000569033 163 ntBASIC18.86■□□□□ 0.61
CCL19Q99731 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.86■□□□□ 0.61
CCL19Q99731 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCL19Q99731 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL19Q99731 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CCL19Q99731 HLA-L-209ENST00000420110 1011 ntBASIC18.85■□□□□ 0.61
CCL19Q99731 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.85■□□□□ 0.61
CCL19Q99731 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL19Q99731 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
CCL19Q99731 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCL19Q99731 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL19Q99731 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL19Q99731 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCL19Q99731 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms