Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.59■□□□□ 0.57
CCL13Q99616 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL13Q99616 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCL13Q99616 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCL13Q99616 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CCL13Q99616 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL13Q99616 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL13Q99616 DUSP8P3-201ENST00000399571 1760 ntBASIC18.59■□□□□ 0.57
CCL13Q99616 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCL13Q99616 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL13Q99616 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL13Q99616 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.57
CCL13Q99616 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL13Q99616 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL13Q99616 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL13Q99616 AC096631.2-201ENST00000436136 790 ntBASIC18.58■□□□□ 0.56
CCL13Q99616 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.58■□□□□ 0.56
CCL13Q99616 DUX4L19-201ENST00000557448 1267 ntBASIC18.58■□□□□ 0.56
CCL13Q99616 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.58■□□□□ 0.56
CCL13Q99616 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.58■□□□□ 0.56
CCL13Q99616 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.58■□□□□ 0.56
CCL13Q99616 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL13Q99616 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL13Q99616 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL13Q99616 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCL13Q99616 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.58■□□□□ 0.56
CCL13Q99616 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL13Q99616 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL13Q99616 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL13Q99616 UNC93B3-201ENST00000308076 687 ntBASIC18.57■□□□□ 0.56
CCL13Q99616 SERBP1P1-201ENST00000396021 1160 ntBASIC18.57■□□□□ 0.56
CCL13Q99616 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.57■□□□□ 0.56
CCL13Q99616 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL13Q99616 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL13Q99616 MIR3181-201ENST00000578512 73 ntBASIC18.57■□□□□ 0.56
CCL13Q99616 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL13Q99616 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.57■□□□□ 0.56
CCL13Q99616 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL13Q99616 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CCL13Q99616 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL13Q99616 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL13Q99616 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.56■□□□□ 0.56
CCL13Q99616 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
CCL13Q99616 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
CCL13Q99616 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.56■□□□□ 0.56
CCL13Q99616 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL13Q99616 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCL13Q99616 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.55■□□□□ 0.56
CCL13Q99616 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL13Q99616 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL13Q99616 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCL13Q99616 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL13Q99616 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL13Q99616 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL13Q99616 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCL13Q99616 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL13Q99616 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL13Q99616 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL13Q99616 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCL13Q99616 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL13Q99616 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.53■□□□□ 0.56
CCL13Q99616 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCL13Q99616 AL499627.2-201ENST00000606283 725 ntBASIC18.53■□□□□ 0.56
CCL13Q99616 AL136162.1-201ENST00000607711 1078 ntBASIC18.53■□□□□ 0.56
CCL13Q99616 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms