Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC32.32■■■□□ 2.77
SCAF11Q99590 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
SCAF11Q99590 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.32■■■□□ 2.76
SCAF11Q99590 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF11Q99590 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
SCAF11Q99590 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF11Q99590 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.31■■■□□ 2.76
SCAF11Q99590 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC32.31■■■□□ 2.76
SCAF11Q99590 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF11Q99590 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC32.31■■■□□ 2.76
SCAF11Q99590 MAP2K4P1-201ENST00000438453 1195 ntBASIC32.31■■■□□ 2.76
SCAF11Q99590 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC32.31■■■□□ 2.76
SCAF11Q99590 DBI-210ENST00000542275 757 ntTSL 5 BASIC32.31■■■□□ 2.76
SCAF11Q99590 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.31■■■□□ 2.76
SCAF11Q99590 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF11Q99590 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC32.31■■■□□ 2.76
SCAF11Q99590 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF11Q99590 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF11Q99590 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF11Q99590 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.3■■■□□ 2.76
SCAF11Q99590 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC32.3■■■□□ 2.76
SCAF11Q99590 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF11Q99590 AL499627.2-201ENST00000606283 725 ntBASIC32.3■■■□□ 2.76
SCAF11Q99590 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC32.3■■■□□ 2.76
SCAF11Q99590 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.3■■■□□ 2.76
SCAF11Q99590 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.3■■■□□ 2.76
SCAF11Q99590 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF11Q99590 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.3■■■□□ 2.76
SCAF11Q99590 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC32.3■■■□□ 2.76
SCAF11Q99590 AC138932.3-201ENST00000567634 1902 ntBASIC32.3■■■□□ 2.76
SCAF11Q99590 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.29■■■□□ 2.76
SCAF11Q99590 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.29■■■□□ 2.76
SCAF11Q99590 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SCAF11Q99590 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF11Q99590 CROCCP5-201ENST00000436658 830 ntBASIC32.29■■■□□ 2.76
SCAF11Q99590 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC32.29■■■□□ 2.76
SCAF11Q99590 GALNS-213ENST00000569433 723 ntTSL 3 BASIC32.29■■■□□ 2.76
SCAF11Q99590 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC32.29■■■□□ 2.76
SCAF11Q99590 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.29■■■□□ 2.76
SCAF11Q99590 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF11Q99590 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF11Q99590 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC32.28■■■□□ 2.76
SCAF11Q99590 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
SCAF11Q99590 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC32.28■■■□□ 2.76
SCAF11Q99590 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC32.28■■■□□ 2.76
SCAF11Q99590 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF11Q99590 TPRG1LP1-201ENST00000598702 760 ntBASIC32.28■■■□□ 2.76
SCAF11Q99590 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF11Q99590 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF11Q99590 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF11Q99590 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF11Q99590 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
SCAF11Q99590 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF11Q99590 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF11Q99590 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
SCAF11Q99590 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC32.27■■■□□ 2.76
SCAF11Q99590 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SCAF11Q99590 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC32.26■■■□□ 2.76
SCAF11Q99590 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SCAF11Q99590 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC32.26■■■□□ 2.75
SCAF11Q99590 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC32.26■■■□□ 2.75
SCAF11Q99590 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
SCAF11Q99590 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF11Q99590 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF11Q99590 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF11Q99590 AC020928.2-201ENST00000588717 2197 ntBASIC32.25■■■□□ 2.75
SCAF11Q99590 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
SCAF11Q99590 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 AC006970.2-201ENST00000450065 779 ntBASIC32.24■■■□□ 2.75
SCAF11Q99590 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC32.24■■■□□ 2.75
SCAF11Q99590 WWOX-218ENST00000627394 894 ntTSL 5 BASIC32.24■■■□□ 2.75
SCAF11Q99590 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF11Q99590 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF11Q99590 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF11Q99590 BID-214ENST00000617586 542 ntTSL 5 BASIC32.23■■■□□ 2.75
SCAF11Q99590 AL109923.1-201ENST00000618799 583 ntBASIC32.23■■■□□ 2.75
SCAF11Q99590 AC105233.4-201ENST00000642045 216 ntBASIC32.23■■■□□ 2.75
SCAF11Q99590 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF11Q99590 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC32.23■■■□□ 2.75
SCAF11Q99590 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC32.23■■■□□ 2.75
SCAF11Q99590 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.23■■■□□ 2.75
SCAF11Q99590 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC32.22■■■□□ 2.75
SCAF11Q99590 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC32.22■■■□□ 2.75
SCAF11Q99590 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms