Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H4Q96RI1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H4Q96RI1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.89■□□□□ 0.94
NR1H4Q96RI1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
NR1H4Q96RI1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.89■□□□□ 0.94
NR1H4Q96RI1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NR1H4Q96RI1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.89■□□□□ 0.93
NR1H4Q96RI1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NR1H4Q96RI1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H4Q96RI1 AC079630.1-202ENST00000618127 1840 ntBASIC20.89■□□□□ 0.93
NR1H4Q96RI1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NR1H4Q96RI1 AL359258.2-201ENST00000564063 1566 ntBASIC20.89■□□□□ 0.93
NR1H4Q96RI1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H4Q96RI1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L13-201ENST00000554103 1267 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L15-201ENST00000611059 1267 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L23-201ENST00000615195 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L24-201ENST00000617576 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L22-201ENST00000618238 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L20-201ENST00000619712 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L21-201ENST00000622058 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L10-201ENST00000622460 1267 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 DUX4L25-201ENST00000624915 1269 ntBASIC20.88■□□□□ 0.93
NR1H4Q96RI1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H4Q96RI1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H4Q96RI1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 DUX4L11-201ENST00000611504 1267 ntBASIC20.86■□□□□ 0.93
NR1H4Q96RI1 DUX4L12-201ENST00000614593 1267 ntBASIC20.86■□□□□ 0.93
NR1H4Q96RI1 DUX4L14-201ENST00000621227 1267 ntBASIC20.86■□□□□ 0.93
NR1H4Q96RI1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H4Q96RI1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H4Q96RI1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 AL157384.1-201ENST00000445995 2473 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms