Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 AL353803.4-201ENST00000565882 1934 ntBASIC25.05■■□□□ 1.6
CDHR1Q96JP9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 TSPY26P-201ENST00000476365 1326 ntBASIC25.05■■□□□ 1.6
CDHR1Q96JP9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CDHR1Q96JP9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CDHR1Q96JP9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR1Q96JP9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR1Q96JP9 AP005435.1-201ENST00000529293 1178 ntBASIC25.03■■□□□ 1.6
CDHR1Q96JP9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR1Q96JP9 AC010525.1-201ENST00000585559 441 ntBASIC25.03■■□□□ 1.6
CDHR1Q96JP9 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.03■■□□□ 1.6
CDHR1Q96JP9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR1Q96JP9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 AC026271.2-201ENST00000428091 497 ntBASIC25.02■■□□□ 1.6
CDHR1Q96JP9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR1Q96JP9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR1Q96JP9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25■■□□□ 1.59
CDHR1Q96JP9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25■■□□□ 1.59
CDHR1Q96JP9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDHR1Q96JP9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CDHR1Q96JP9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CDHR1Q96JP9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25■■□□□ 1.59
CDHR1Q96JP9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25■■□□□ 1.59
CDHR1Q96JP9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDHR1Q96JP9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDHR1Q96JP9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDHR1Q96JP9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
CDHR1Q96JP9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDHR1Q96JP9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDHR1Q96JP9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 MIR6821-201ENST00000617625 74 ntBASIC24.98■■□□□ 1.59
CDHR1Q96JP9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR1Q96JP9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 MIR572-201ENST00000384983 95 ntBASIC24.97■■□□□ 1.59
CDHR1Q96JP9 AC097381.1-201ENST00000429019 1296 ntBASIC24.97■■□□□ 1.59
CDHR1Q96JP9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 MIR5787-201ENST00000611784 55 ntBASIC24.97■■□□□ 1.59
CDHR1Q96JP9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR1Q96JP9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 AC004687.1-201ENST00000579003 1625 ntBASIC24.96■■□□□ 1.59
CDHR1Q96JP9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.96■■□□□ 1.59
CDHR1Q96JP9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.95■■□□□ 1.58
CDHR1Q96JP9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDHR1Q96JP9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms