Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 AC120024.1-201ENST00000562672 995 ntBASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 PVT1_1.1-201ENST00000615125 194 ntBASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 KRT18P24-201ENST00000344739 1156 ntBASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC47A1Q96FL8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 AC092053.2-201ENST00000640557 1818 ntBASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC47A1Q96FL8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC47A1Q96FL8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 AC139530.1-201ENST00000575312 1977 ntBASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 THA1P-201ENST00000590384 1145 ntBASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC47A1Q96FL8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 AL033527.3-201ENST00000566366 1196 ntBASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 C11orf96-202ENST00000528572 1834 ntBASIC20.88■□□□□ 0.93
SLC47A1Q96FL8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLC47A1Q96FL8 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC47A1Q96FL8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 AL137060.1-201ENST00000618151 2648 ntBASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 MIR4508-201ENST00000584178 70 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms