Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2FQ969M7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2FQ969M7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 AL592293.1-201ENST00000502889 1188 ntBASIC20.27■□□□□ 0.84
UBE2FQ969M7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2FQ969M7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2FQ969M7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.83
UBE2FQ969M7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2FQ969M7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2FQ969M7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 AC087742.1-201ENST00000575880 1738 ntBASIC20.26■□□□□ 0.83
UBE2FQ969M7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UBE2FQ969M7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBE2FQ969M7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2FQ969M7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UBE2FQ969M7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2FQ969M7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2FQ969M7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
UBE2FQ969M7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2FQ969M7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2FQ969M7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
UBE2FQ969M7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2FQ969M7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2FQ969M7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 LONRF2P2-201ENST00000439212 571 ntBASIC20.23■□□□□ 0.83
UBE2FQ969M7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2FQ969M7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBE2FQ969M7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2FQ969M7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2FQ969M7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2FQ969M7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2FQ969M7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2FQ969M7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2FQ969M7 RNF126P1-201ENST00000567452 1320 ntBASIC20.22■□□□□ 0.83
UBE2FQ969M7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBE2FQ969M7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2FQ969M7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2FQ969M7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2FQ969M7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
UBE2FQ969M7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2FQ969M7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2FQ969M7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
UBE2FQ969M7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
UBE2FQ969M7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
UBE2FQ969M7 DUX4L9-201ENST00000449051 1259 ntBASIC20.2■□□□□ 0.82
UBE2FQ969M7 MIR6765-201ENST00000614092 87 ntBASIC20.2■□□□□ 0.82
UBE2FQ969M7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2FQ969M7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2FQ969M7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms