Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PJA1Q8NG27 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.87■■□□□ 1.25
PJA1Q8NG27 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.87■■□□□ 1.25
PJA1Q8NG27 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
PJA1Q8NG27 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PJA1Q8NG27 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PJA1Q8NG27 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.86■■□□□ 1.25
PJA1Q8NG27 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PJA1Q8NG27 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.86■■□□□ 1.25
PJA1Q8NG27 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.86■■□□□ 1.25
PJA1Q8NG27 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PJA1Q8NG27 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PJA1Q8NG27 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PJA1Q8NG27 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PJA1Q8NG27 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PJA1Q8NG27 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.85■■□□□ 1.25
PJA1Q8NG27 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PJA1Q8NG27 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.84■■□□□ 1.25
PJA1Q8NG27 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PJA1Q8NG27 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.84■■□□□ 1.25
PJA1Q8NG27 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.84■■□□□ 1.25
PJA1Q8NG27 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.84■■□□□ 1.25
PJA1Q8NG27 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.84■■□□□ 1.25
PJA1Q8NG27 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PJA1Q8NG27 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PJA1Q8NG27 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PJA1Q8NG27 CDCA4P2-201ENST00000441182 718 ntBASIC22.83■■□□□ 1.25
PJA1Q8NG27 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.83■■□□□ 1.25
PJA1Q8NG27 AC010525.1-201ENST00000585559 441 ntBASIC22.83■■□□□ 1.25
PJA1Q8NG27 AC073111.5-205ENST00000641717 521 ntBASIC22.83■■□□□ 1.25
PJA1Q8NG27 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.83■■□□□ 1.25
PJA1Q8NG27 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.82■■□□□ 1.24
PJA1Q8NG27 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.82■■□□□ 1.24
PJA1Q8NG27 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.82■■□□□ 1.24
PJA1Q8NG27 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 AC016769.1-201ENST00000409132 1010 ntBASIC22.82■■□□□ 1.24
PJA1Q8NG27 OR2I1P-207ENST00000453522 948 ntBASIC22.82■■□□□ 1.24
PJA1Q8NG27 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.82■■□□□ 1.24
PJA1Q8NG27 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.82■■□□□ 1.24
PJA1Q8NG27 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PJA1Q8NG27 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PJA1Q8NG27 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PJA1Q8NG27 ABHD17AP1-201ENST00000358206 933 ntBASIC22.81■■□□□ 1.24
PJA1Q8NG27 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PJA1Q8NG27 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PJA1Q8NG27 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PJA1Q8NG27 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
PJA1Q8NG27 ALDH1A3-203ENST00000557963 1670 ntBASIC22.81■■□□□ 1.24
PJA1Q8NG27 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.8■■□□□ 1.24
PJA1Q8NG27 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PJA1Q8NG27 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 AC137761.2-201ENST00000561729 223 ntBASIC22.8■■□□□ 1.24
PJA1Q8NG27 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PJA1Q8NG27 AC145350.3-201ENST00000569033 163 ntBASIC22.8■■□□□ 1.24
PJA1Q8NG27 KRT18P61-201ENST00000585825 1298 ntBASIC22.8■■□□□ 1.24
PJA1Q8NG27 AL499627.2-201ENST00000606283 725 ntBASIC22.8■■□□□ 1.24
PJA1Q8NG27 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.8■■□□□ 1.24
PJA1Q8NG27 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PJA1Q8NG27 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
PJA1Q8NG27 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PJA1Q8NG27 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PJA1Q8NG27 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PJA1Q8NG27 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.79■■□□□ 1.24
PJA1Q8NG27 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.79■■□□□ 1.24
PJA1Q8NG27 AC104771.1-201ENST00000603335 964 ntBASIC22.79■■□□□ 1.24
PJA1Q8NG27 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.79■■□□□ 1.24
PJA1Q8NG27 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms