Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.21■■■■□ 3.23
CFAP43Q8NDM7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CFAP43Q8NDM7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC35.21■■■■□ 3.23
CFAP43Q8NDM7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC35.21■■■■□ 3.23
CFAP43Q8NDM7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC35.21■■■■□ 3.23
CFAP43Q8NDM7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC35.2■■■■□ 3.23
CFAP43Q8NDM7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CFAP43Q8NDM7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CFAP43Q8NDM7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
CFAP43Q8NDM7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC35.2■■■■□ 3.23
CFAP43Q8NDM7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 GXYLT1P5-201ENST00000614548 1189 ntBASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 LINC00543-201ENST00000567234 1845 ntBASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
CFAP43Q8NDM7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC35.18■■■■□ 3.22
CFAP43Q8NDM7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CFAP43Q8NDM7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC35.18■■■■□ 3.22
CFAP43Q8NDM7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC35.18■■■■□ 3.22
CFAP43Q8NDM7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 AC080038.1-201ENST00000611274 1154 ntBASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
CFAP43Q8NDM7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 CDCA4P2-201ENST00000441182 718 ntBASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CFAP43Q8NDM7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC35.15■■■■□ 3.22
CFAP43Q8NDM7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CFAP43Q8NDM7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 AL139125.2-201ENST00000623134 1869 ntBASIC35.13■■■■□ 3.21
CFAP43Q8NDM7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CFAP43Q8NDM7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
CFAP43Q8NDM7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
CFAP43Q8NDM7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CFAP43Q8NDM7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 NT5C3AP1-201ENST00000394500 1012 ntBASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 AC016769.1-201ENST00000409132 1010 ntBASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC35.11■■■■□ 3.21
CFAP43Q8NDM7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
CFAP43Q8NDM7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC35.1■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms