Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 AC010525.1-201ENST00000585559 441 ntBASIC23.28■■□□□ 1.32
LEMD2Q8NC56 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LEMD2Q8NC56 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
LEMD2Q8NC56 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L2-201ENST00000561772 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L6-201ENST00000626483 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L1-201ENST00000627662 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L8-201ENST00000629013 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L3-201ENST00000630187 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L7-201ENST00000630678 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 DUX4L5-201ENST00000630834 1275 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 AL031602.1-201ENST00000633169 911 ntBASIC23.26■■□□□ 1.31
LEMD2Q8NC56 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LEMD2Q8NC56 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LEMD2Q8NC56 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LEMD2Q8NC56 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.25■■□□□ 1.31
LEMD2Q8NC56 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LEMD2Q8NC56 KRT18P5-201ENST00000436075 1291 ntBASIC23.25■■□□□ 1.31
LEMD2Q8NC56 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.25■■□□□ 1.31
LEMD2Q8NC56 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 MIR6084-201ENST00000622012 110 ntBASIC23.24■■□□□ 1.31
LEMD2Q8NC56 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
LEMD2Q8NC56 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 AC022517.1-201ENST00000592429 346 ntBASIC23.23■■□□□ 1.31
LEMD2Q8NC56 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 LINC02228-203ENST00000641970 1355 ntBASIC23.23■■□□□ 1.31
LEMD2Q8NC56 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LEMD2Q8NC56 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LEMD2Q8NC56 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LEMD2Q8NC56 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LEMD2Q8NC56 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LEMD2Q8NC56 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms