Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 AC092171.4-201ENST00000609130 632 ntBASIC18.05■□□□□ 0.48
LINC00311Q8N616 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00311Q8N616 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC00311Q8N616 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 SRD5A1P1-201ENST00000442297 786 ntBASIC18.04■□□□□ 0.48
LINC00311Q8N616 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.04■□□□□ 0.48
LINC00311Q8N616 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00311Q8N616 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00311Q8N616 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00311Q8N616 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00311Q8N616 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC00311Q8N616 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00311Q8N616 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00311Q8N616 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC00311Q8N616 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00311Q8N616 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00311Q8N616 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.03■□□□□ 0.48
LINC00311Q8N616 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00311Q8N616 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LINC00311Q8N616 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00311Q8N616 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00311Q8N616 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00311Q8N616 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00311Q8N616 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC00311Q8N616 AC133561.1-201ENST00000568600 2415 ntBASIC18.02■□□□□ 0.47
LINC00311Q8N616 C1orf229-201ENST00000623686 2258 ntBASIC18.02■□□□□ 0.47
LINC00311Q8N616 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.02■□□□□ 0.47
LINC00311Q8N616 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00311Q8N616 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00311Q8N616 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00311Q8N616 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00311Q8N616 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00311Q8N616 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00311Q8N616 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC00311Q8N616 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00311Q8N616 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LINC00311Q8N616 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00311Q8N616 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LINC00311Q8N616 AC099791.2-201ENST00000605725 427 ntBASIC18.01■□□□□ 0.47
LINC00311Q8N616 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC00311Q8N616 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC00311Q8N616 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00311Q8N616 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LINC00311Q8N616 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18■□□□□ 0.47
LINC00311Q8N616 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18■□□□□ 0.47
LINC00311Q8N616 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18■□□□□ 0.47
LINC00311Q8N616 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18■□□□□ 0.47
LINC00311Q8N616 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00311Q8N616 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00311Q8N616 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms