Protein–RNA interactions for Protein: Q8N145

LGI3, Leucine-rich repeat LGI family member 3, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3Q8N145 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI3Q8N145 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI3Q8N145 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGI3Q8N145 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LGI3Q8N145 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI3Q8N145 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.33■□□□□ 0.53
LGI3Q8N145 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LGI3Q8N145 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LGI3Q8N145 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI3Q8N145 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI3Q8N145 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI3Q8N145 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LGI3Q8N145 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LGI3Q8N145 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGI3Q8N145 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI3Q8N145 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI3Q8N145 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.32■□□□□ 0.52
LGI3Q8N145 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.32■□□□□ 0.52
LGI3Q8N145 AC011551.1-201ENST00000614101 683 ntBASIC18.32■□□□□ 0.52
LGI3Q8N145 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LGI3Q8N145 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGI3Q8N145 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.31■□□□□ 0.52
LGI3Q8N145 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LGI3Q8N145 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.31■□□□□ 0.52
LGI3Q8N145 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGI3Q8N145 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.31■□□□□ 0.52
LGI3Q8N145 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
LGI3Q8N145 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.3■□□□□ 0.52
LGI3Q8N145 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LGI3Q8N145 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LGI3Q8N145 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.3■□□□□ 0.52
LGI3Q8N145 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.3■□□□□ 0.52
LGI3Q8N145 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.3■□□□□ 0.52
LGI3Q8N145 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LGI3Q8N145 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.3■□□□□ 0.52
LGI3Q8N145 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.3■□□□□ 0.52
LGI3Q8N145 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LGI3Q8N145 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGI3Q8N145 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LGI3Q8N145 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 FBXW4P1-201ENST00000426721 2239 ntBASIC18.29■□□□□ 0.52
LGI3Q8N145 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LGI3Q8N145 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LGI3Q8N145 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
LGI3Q8N145 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.28■□□□□ 0.52
LGI3Q8N145 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LGI3Q8N145 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LGI3Q8N145 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 AL353803.4-201ENST00000565882 1934 ntBASIC18.28■□□□□ 0.52
LGI3Q8N145 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.28■□□□□ 0.52
LGI3Q8N145 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LGI3Q8N145 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.28■□□□□ 0.52
LGI3Q8N145 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms