Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SFR1Q86XK3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.6■■□□□ 1.53
SFR1Q86XK3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SFR1Q86XK3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.6■■□□□ 1.53
SFR1Q86XK3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.6■■□□□ 1.53
SFR1Q86XK3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.6■■□□□ 1.53
SFR1Q86XK3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SFR1Q86XK3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SFR1Q86XK3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SFR1Q86XK3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
SFR1Q86XK3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.59■■□□□ 1.53
SFR1Q86XK3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SFR1Q86XK3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.59■■□□□ 1.53
SFR1Q86XK3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFR1Q86XK3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
SFR1Q86XK3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFR1Q86XK3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFR1Q86XK3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.58■■□□□ 1.53
SFR1Q86XK3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SFR1Q86XK3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFR1Q86XK3 AL136116.3-201ENST00000402907 1138 ntBASIC24.58■■□□□ 1.53
SFR1Q86XK3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.58■■□□□ 1.53
SFR1Q86XK3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SFR1Q86XK3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
SFR1Q86XK3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SFR1Q86XK3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.58■■□□□ 1.52
SFR1Q86XK3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SFR1Q86XK3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SFR1Q86XK3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SFR1Q86XK3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SFR1Q86XK3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SFR1Q86XK3 AC133561.1-201ENST00000568600 2415 ntBASIC24.56■■□□□ 1.52
SFR1Q86XK3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SFR1Q86XK3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SFR1Q86XK3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SFR1Q86XK3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SFR1Q86XK3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SFR1Q86XK3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SFR1Q86XK3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SFR1Q86XK3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SFR1Q86XK3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.55■■□□□ 1.52
SFR1Q86XK3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SFR1Q86XK3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.54■■□□□ 1.52
SFR1Q86XK3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SFR1Q86XK3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SFR1Q86XK3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.54■■□□□ 1.52
SFR1Q86XK3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.54■■□□□ 1.52
SFR1Q86XK3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SFR1Q86XK3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.54■■□□□ 1.52
SFR1Q86XK3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SFR1Q86XK3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SFR1Q86XK3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 C1orf229-201ENST00000623686 2258 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SFR1Q86XK3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 AL499627.2-201ENST00000606283 725 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 pRNA.6-201ENST00000610482 90 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 pRNA.5-201ENST00000612139 90 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 pRNA.11-201ENST00000618423 90 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 pRNA.13-201ENST00000619112 90 ntBASIC24.53■■□□□ 1.52
SFR1Q86XK3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SFR1Q86XK3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SFR1Q86XK3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SFR1Q86XK3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.53■■□□□ 1.52
SFR1Q86XK3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.52■■□□□ 1.52
SFR1Q86XK3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SFR1Q86XK3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SFR1Q86XK3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.52■■□□□ 1.52
SFR1Q86XK3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.52■■□□□ 1.52
SFR1Q86XK3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
SFR1Q86XK3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SFR1Q86XK3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SFR1Q86XK3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SFR1Q86XK3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 AC004687.1-201ENST00000579003 1625 ntBASIC24.51■■□□□ 1.51
SFR1Q86XK3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SFR1Q86XK3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 AC008406.3-201ENST00000620001 1374 ntBASIC24.51■■□□□ 1.51
SFR1Q86XK3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SFR1Q86XK3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.51■■□□□ 1.51
SFR1Q86XK3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 663.9 ms