Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.03■□□□□ 0.8
SHFQ7M4L6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.03■□□□□ 0.8
SHFQ7M4L6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.03■□□□□ 0.8
SHFQ7M4L6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
SHFQ7M4L6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SHFQ7M4L6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SHFQ7M4L6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHFQ7M4L6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SHFQ7M4L6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 TSPY13P-201ENST00000338964 914 ntBASIC20.02■□□□□ 0.8
SHFQ7M4L6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHFQ7M4L6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHFQ7M4L6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHFQ7M4L6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHFQ7M4L6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHFQ7M4L6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.02■□□□□ 0.79
SHFQ7M4L6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHFQ7M4L6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 MIR4281-201ENST00000580852 62 ntBASIC20.01■□□□□ 0.79
SHFQ7M4L6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SHFQ7M4L6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHFQ7M4L6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20■□□□□ 0.79
SHFQ7M4L6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20■□□□□ 0.79
SHFQ7M4L6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHFQ7M4L6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHFQ7M4L6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20■□□□□ 0.79
SHFQ7M4L6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20■□□□□ 0.79
SHFQ7M4L6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SHFQ7M4L6 AF131216.4-201ENST00000638924 1588 ntBASIC20■□□□□ 0.79
SHFQ7M4L6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 AL353803.4-201ENST00000565882 1934 ntBASIC19.99■□□□□ 0.79
SHFQ7M4L6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
SHFQ7M4L6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHFQ7M4L6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
SHFQ7M4L6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.98■□□□□ 0.79
SHFQ7M4L6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.98■□□□□ 0.79
SHFQ7M4L6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHFQ7M4L6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHFQ7M4L6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHFQ7M4L6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms