Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MRPL54Q6P161 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 AC092667.1-201ENST00000434301 2586 ntBASIC16.75■□□□□ 0.27
MRPL54Q6P161 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 AP006261.1-201ENST00000584783 668 ntBASIC16.75■□□□□ 0.27
MRPL54Q6P161 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.75■□□□□ 0.27
MRPL54Q6P161 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL54Q6P161 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 AL161729.1-201ENST00000604104 1402 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L13-201ENST00000554103 1267 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L15-201ENST00000611059 1267 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L23-201ENST00000615195 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L24-201ENST00000617576 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L22-201ENST00000618238 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L20-201ENST00000619712 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L21-201ENST00000622058 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L10-201ENST00000622460 1267 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 DUX4L25-201ENST00000624915 1269 ntBASIC16.74■□□□□ 0.27
MRPL54Q6P161 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL54Q6P161 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MRPL54Q6P161 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MRPL54Q6P161 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MRPL54Q6P161 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MRPL54Q6P161 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.73■□□□□ 0.27
MRPL54Q6P161 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL54Q6P161 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL54Q6P161 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL54Q6P161 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL54Q6P161 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPL54Q6P161 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPL54Q6P161 RNF165-205ENST00000588679 2904 ntBASIC16.71■□□□□ 0.27
MRPL54Q6P161 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MRPL54Q6P161 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL54Q6P161 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MRPL54Q6P161 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.71■□□□□ 0.26
MRPL54Q6P161 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.71■□□□□ 0.26
MRPL54Q6P161 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPL54Q6P161 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.7■□□□□ 0.26
MRPL54Q6P161 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL54Q6P161 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MRPL54Q6P161 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms