Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDPF1Q6NVV7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDPF1Q6NVV7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CDPF1Q6NVV7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDPF1Q6NVV7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 ANOS2P-203ENST00000472227 1816 ntBASIC16.82■□□□□ 0.28
CDPF1Q6NVV7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDPF1Q6NVV7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDPF1Q6NVV7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDPF1Q6NVV7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDPF1Q6NVV7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDPF1Q6NVV7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms