Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
SNAPC4Q5SXM2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 DUX4L4-201ENST00000566884 1269 ntBASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
SNAPC4Q5SXM2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC37.01■■■■□ 3.52
SNAPC4Q5SXM2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC37.01■■■■□ 3.51
SNAPC4Q5SXM2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
SNAPC4Q5SXM2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
SNAPC4Q5SXM2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC37■■■■□ 3.51
SNAPC4Q5SXM2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC37■■■■□ 3.51
SNAPC4Q5SXM2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC37■■■■□ 3.51
SNAPC4Q5SXM2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC37■■■■□ 3.51
SNAPC4Q5SXM2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 KRT19P1-201ENST00000405746 1186 ntBASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
SNAPC4Q5SXM2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 AC093827.2-201ENST00000512654 315 ntBASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 MFSD11-216ENST00000590393 1141 ntBASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
SNAPC4Q5SXM2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC36.97■■■■□ 3.51
SNAPC4Q5SXM2 SLC7A5P2-201ENST00000553010 536 ntBASIC36.97■■■■□ 3.51
SNAPC4Q5SXM2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SNAPC4Q5SXM2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC36.97■■■■□ 3.51
SNAPC4Q5SXM2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC36.96■■■■□ 3.51
SNAPC4Q5SXM2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 AC092803.2-201ENST00000564287 1899 ntBASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
SNAPC4Q5SXM2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC36.95■■■■□ 3.5
SNAPC4Q5SXM2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 TSPY6P-201ENST00000448518 926 ntBASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC36.94■■■■□ 3.5
SNAPC4Q5SXM2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC36.93■■■■□ 3.5
SNAPC4Q5SXM2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 KRT18P11-201ENST00000435214 1283 ntBASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC36.92■■■■□ 3.5
SNAPC4Q5SXM2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 DET1-205ENST00000558413 583 ntTSL 4 BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC36.91■■■■□ 3.5
SNAPC4Q5SXM2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 AL121832.2-201ENST00000610979 668 ntBASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC36.9■■■■□ 3.5
SNAPC4Q5SXM2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC36.9■■■■□ 3.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms