Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-BQ31612 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-BQ31612 AC022211.4-201ENST00000625094 2161 ntBASIC21.82■■□□□ 1.08
HLA-BQ31612 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-BQ31612 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.81■■□□□ 1.08
HLA-BQ31612 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.81■■□□□ 1.08
HLA-BQ31612 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-BQ31612 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-BQ31612 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.81■■□□□ 1.08
HLA-BQ31612 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.81■■□□□ 1.08
HLA-BQ31612 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-BQ31612 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-BQ31612 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HLA-BQ31612 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HLA-BQ31612 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.8■■□□□ 1.08
HLA-BQ31612 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.8■■□□□ 1.08
HLA-BQ31612 AC080038.1-201ENST00000611274 1154 ntBASIC21.8■■□□□ 1.08
HLA-BQ31612 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 AC144652.1-201ENST00000609974 1624 ntBASIC21.8■■□□□ 1.08
HLA-BQ31612 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-BQ31612 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.79■■□□□ 1.08
HLA-BQ31612 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-BQ31612 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-BQ31612 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-BQ31612 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-BQ31612 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-BQ31612 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HLA-BQ31612 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-BQ31612 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-BQ31612 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.78■■□□□ 1.08
HLA-BQ31612 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HLA-BQ31612 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.77■■□□□ 1.08
HLA-BQ31612 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.77■■□□□ 1.08
HLA-BQ31612 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
HLA-BQ31612 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 AC006015.1-201ENST00000429970 570 ntBASIC21.77■■□□□ 1.08
HLA-BQ31612 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.77■■□□□ 1.08
HLA-BQ31612 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.77■■□□□ 1.08
HLA-BQ31612 KRT18P61-201ENST00000585825 1298 ntBASIC21.77■■□□□ 1.08
HLA-BQ31612 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-BQ31612 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.77■■□□□ 1.08
HLA-BQ31612 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HLA-BQ31612 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.76■■□□□ 1.07
HLA-BQ31612 AC016769.1-201ENST00000409132 1010 ntBASIC21.76■■□□□ 1.07
HLA-BQ31612 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HLA-BQ31612 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.76■■□□□ 1.07
HLA-BQ31612 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-BQ31612 AC137761.2-201ENST00000561729 223 ntBASIC21.76■■□□□ 1.07
HLA-BQ31612 AC145350.3-201ENST00000569033 163 ntBASIC21.76■■□□□ 1.07
HLA-BQ31612 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
HLA-BQ31612 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-BQ31612 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-BQ31612 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-BQ31612 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-BQ31612 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-BQ31612 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-BQ31612 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.75■■□□□ 1.07
HLA-BQ31612 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-BQ31612 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.75■■□□□ 1.07
HLA-BQ31612 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-BQ31612 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-BQ31612 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-BQ31612 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-BQ31612 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-BQ31612 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms