Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PDS5AQ29RF7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.89■■□□□ 1.9
PDS5AQ29RF7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PDS5AQ29RF7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.89■■□□□ 1.89
PDS5AQ29RF7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDS5AQ29RF7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.87■■□□□ 1.89
PDS5AQ29RF7 AL358852.1-201ENST00000623174 1268 ntBASIC26.87■■□□□ 1.89
PDS5AQ29RF7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 AL353803.4-201ENST00000565882 1934 ntBASIC26.86■■□□□ 1.89
PDS5AQ29RF7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
PDS5AQ29RF7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 AC027612.3-201ENST00000413684 1047 ntBASIC26.85■■□□□ 1.89
PDS5AQ29RF7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.85■■□□□ 1.89
PDS5AQ29RF7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 AC087623.3-201ENST00000607047 1098 ntBASIC26.84■■□□□ 1.89
PDS5AQ29RF7 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDS5AQ29RF7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.83■■□□□ 1.89
PDS5AQ29RF7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
PDS5AQ29RF7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 YBX1P1-201ENST00000445822 960 ntBASIC26.82■■□□□ 1.88
PDS5AQ29RF7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 AC012414.1-201ENST00000556676 535 ntBASIC26.82■■□□□ 1.88
PDS5AQ29RF7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 AL354811.1-201ENST00000610286 706 ntBASIC26.82■■□□□ 1.88
PDS5AQ29RF7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.82■■□□□ 1.88
PDS5AQ29RF7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDS5AQ29RF7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDS5AQ29RF7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDS5AQ29RF7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDS5AQ29RF7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.8■■□□□ 1.88
PDS5AQ29RF7 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.8■■□□□ 1.88
PDS5AQ29RF7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.8■■□□□ 1.88
PDS5AQ29RF7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms