Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 AL137060.1-201ENST00000618151 2648 ntBASIC20.3■□□□□ 0.84
CDC42P60953 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42P60953 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC42P60953 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC42P60953 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 SPCS2P3-201ENST00000500401 656 ntBASIC20.29■□□□□ 0.84
CDC42P60953 MIR6765-201ENST00000614092 87 ntBASIC20.29■□□□□ 0.84
CDC42P60953 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC42P60953 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC42P60953 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42P60953 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CDC42P60953 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC42P60953 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC42P60953 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42P60953 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42P60953 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42P60953 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CDC42P60953 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC42P60953 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42P60953 AL024507.2-201ENST00000606070 2574 ntBASIC20.28■□□□□ 0.84
CDC42P60953 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC42P60953 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC42P60953 AL592293.1-201ENST00000502889 1188 ntBASIC20.27■□□□□ 0.84
CDC42P60953 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42P60953 AL353803.4-201ENST00000565882 1934 ntBASIC20.27■□□□□ 0.84
CDC42P60953 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.27■□□□□ 0.83
CDC42P60953 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDC42P60953 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDC42P60953 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDC42P60953 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDC42P60953 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 LONRF2P2-201ENST00000439212 571 ntBASIC20.26■□□□□ 0.83
CDC42P60953 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDC42P60953 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC42P60953 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC42P60953 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CDC42P60953 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42P60953 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDC42P60953 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC42P60953 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDC42P60953 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC42P60953 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42P60953 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDC42P60953 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDC42P60953 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CDC42P60953 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42P60953 FBXW4P1-201ENST00000426721 2239 ntBASIC20.23■□□□□ 0.83
CDC42P60953 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDC42P60953 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42P60953 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42P60953 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC42P60953 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42P60953 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC42P60953 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC42P60953 AC080038.3-201ENST00000623346 1952 ntBASIC20.22■□□□□ 0.83
CDC42P60953 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CDC42P60953 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms