Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN12P56749 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN12P56749 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN12P56749 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN12P56749 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN12P56749 AL353803.4-201ENST00000565882 1934 ntBASIC19.3■□□□□ 0.68
CLDN12P56749 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN12P56749 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN12P56749 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN12P56749 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN12P56749 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN12P56749 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN12P56749 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 AC011551.1-201ENST00000614101 683 ntBASIC19.29■□□□□ 0.68
CLDN12P56749 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN12P56749 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN12P56749 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN12P56749 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN12P56749 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN12P56749 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN12P56749 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN12P56749 MIR4449-201ENST00000578365 66 ntBASIC19.28■□□□□ 0.68
CLDN12P56749 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN12P56749 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLDN12P56749 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN12P56749 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN12P56749 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
CLDN12P56749 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CLDN12P56749 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN12P56749 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN12P56749 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN12P56749 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN12P56749 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN12P56749 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN12P56749 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN12P56749 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN12P56749 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN12P56749 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN12P56749 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN12P56749 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN12P56749 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN12P56749 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN12P56749 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN12P56749 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN12P56749 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN12P56749 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CLDN12P56749 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN12P56749 RNF126P1-201ENST00000567452 1320 ntBASIC19.25■□□□□ 0.67
CLDN12P56749 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN12P56749 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN12P56749 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN12P56749 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN12P56749 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN12P56749 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN12P56749 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN12P56749 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN12P56749 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN12P56749 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN12P56749 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN12P56749 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN12P56749 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN12P56749 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CLDN12P56749 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN12P56749 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN12P56749 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLDN12P56749 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN12P56749 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN12P56749 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN12P56749 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLDN12P56749 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN12P56749 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN12P56749 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN12P56749 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN12P56749 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN12P56749 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CLDN12P56749 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN12P56749 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN12P56749 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN12P56749 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms